Package: cohorttools 0.1.6
cohorttools: Cohort Data Analyses
Functions to make lifetables and to calculate hazard function estimate using Poisson regression model with splines. Includes function to draw simple flowchart of cohort study. Function boxesLx() makes boxes of transition rates between states. It utilizes 'Epi' package 'Lexis' data.
Authors:
cohorttools_0.1.6.tar.gz
cohorttools_0.1.6.zip(r-4.5)cohorttools_0.1.6.zip(r-4.4)cohorttools_0.1.6.zip(r-4.3)
cohorttools_0.1.6.tgz(r-4.5-any)cohorttools_0.1.6.tgz(r-4.4-any)cohorttools_0.1.6.tgz(r-4.3-any)
cohorttools_0.1.6.tar.gz(r-4.5-noble)cohorttools_0.1.6.tar.gz(r-4.4-noble)
cohorttools_0.1.6.tgz(r-4.4-emscripten)cohorttools_0.1.6.tgz(r-4.3-emscripten)
cohorttools.pdf |cohorttools.html✨
cohorttools/json (API)
NEWS
| # Install 'cohorttools' in R: |
| install.packages('cohorttools', repos = c('https://jkhaukka.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:0029bdd514. Checks:5 OK, 3 NOTE. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 30 2025 |
| R-4.5-win | NOTE | Jan 30 2025 |
| R-4.5-mac | NOTE | Jan 30 2025 |
| R-4.5-linux | NOTE | Jan 30 2025 |
| R-4.4-win | OK | Jan 30 2025 |
| R-4.4-mac | OK | Jan 30 2025 |
| R-4.3-win | OK | Jan 30 2025 |
| R-4.3-mac | OK | Jan 30 2025 |
Exports:boxesLxestim.hazardgv2imagemkflowchartmkratetableplotcumincplotratetable
Dependencies:base64encbitbit64bslibcachemclicliprcmprskcolorspacecpp11crayoncurldata.tableDiagrammeRDiagrammeRsvgdigestdplyrEpietmevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhmshtmltoolshtmlwidgetsigraphisobandjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmenumDerivpillarpkgconfigplyrprettyunitsprogresspurrrR6rappdirsRColorBrewerRcppRcppArmadilloreadrrlangrmarkdownrstudioapirsvgsassscalesstringistringrsurvivaltibbletidyrtidyselecttinytextzdbutf8V8vctrsviridisLitevisNetworkvroomwithrxfunyamlzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Boxes plot summarizing Lexis object | boxesLx |
| Estimates hazard function using Poisson model | estim.hazard |
| Function makes image from graphviz code | gv2image |
| Function makes flowchart in graphviz | mkflowchart |
| Function makes rate table with confidence intervals for crude incidences (rates) | mkratetable |
| Plots cumulative incidence rates | plotcuminc |
| Function makes plot(s) from ratetable | plotratetable |
